Ackleh AS, Hallam TG, Muller-Landau HC (1995) Estimation of sticking and contact efficiencies in aggregation of phytoplankton: The 1993 SIGMA tank experiment. Deep-Sea Research II, 42: 185-201

Anderson JJ (1982) The nitrite oxygen interface at the top of the oxygen minimum zone in the eastern tropical North Pacific. Deep-Sea Research, 29:1193-1201

Anderson TR (1993) A spectrally averaged model of light penetration and photosynthesis. Limnology and Oceanography, 38:1403-1419

Arrigo KR, Brown CW (1996) Impact of chromophoric dissolved organic matter on UV inhibition of primary productivity in the sea. Marine Ecology Progress Series, 140: 207-216

Atlas D, Bannister TT (1980) Dependence of mean spectral extinction coefficient of phytoplankton on depth, water color, and species, Limnol. Oceanogr., 25, 157-159

Ayoub LM, Hargreaves BR, Morris DP (1998) Modelling UV attenuation (K_d) from total UV absorption. SPIE Ocean Optics XIV:1135-1143.

Azam F., Smith D.C. (1991) Bacterial influence on the variability in the ocean’s biogeochemical state. A mechanistic view. In: Demers, S. (Ed.) Particle Analysis in Oceanography. Springer-Verlag Berlin Heidelberg, 1991

Babin M., Therriault J.-C., Legendre L., Nieke B., Reuter R., Condal A. (1995) Relationship between the maximum quantum yield of carbon fixation and the minimum quantum yield of chlorophyll a in vivo fluorescence of St. Lawrence. Limnology and Oceanography, 40,  5,  956-968.

Babin M., Morel A., Claustre H., Bricaud A., Kolber Z., Falkowski P.G. (1996) Nitrogen- and irradiance-dependent variations of the maximum quantum yield of carbon fixation in eutrophic, mesotrophic and ologotrophic marine systems. Deep-Sea Research I, 43, 8, 1241-1272.

Baker K.S., Frouin R. (1987) Relation between photosynthetically available radiation and total insolation at the ocean surface under clear skies. Limnol. Oceanogr., 32, 6, 1370-1377.

Baker K.S., Smith R.C. (1978) Optical classification of natural waters. Limnology and Oceanography, 23, 2, 260-267.

Baker K.S., Smith R.C. (1982) Bio-optical classification and model of natural waters. 2. Limnology and Oceanography, 27, 3, 500-509.

Bange. H.W., Rapsomanikis S., Andreae M.O. (1996) Nitrous oxide emissions from the Arabian Sea. Geophysical Research Letters, 23, 22, 3175-3178.

Bange H.W., Ramesh R., Rapsomanikis S., Andreae M.O. (1998) Methane in surface waters of the Arabian Sea. Geophysical Research Letters, 25, 19, 3547-3550.

Banse K. (1992) Grazing, temporal changes of phytoplankton concentrations, and the microbial loop in the open sea. In: Falkowski PG, Woodhead AD (Ed.) Primary Productivity and Biogeochemical Cycles in the Sea. Plenum Press, New York, 1992.

Barth H., Grisard K., Holtsch K., Reuter R., Stute U.(1997) Polychromatic transmissometer for in situ measurements of suspended particles and gelbstoff in water. Applied Optics, 36, 30, 7919-7928

Barth, H (1999) Substanzspezifische Analyse spektraler Attenuationskoeffizienten und ihr Einfluß auf das Strahlungsfeld im Meer. Dissertation (PhD Thesis), Institute of Physics, University of Oldenburg, Germany

Barth H Reuter R Schröder M (2001) Measurement and Simulation of substance specific contributions of phytoplankton, gelbstoff, and mineral particles to the underwater light field in coastal waters. In: Lidar Remote Sensing of Land and Sea, R. Reuter (editor), EARSeL eProceedings No. 1, 165-174

Baumert H. (1996) On the theory of photosynthesis and growth in phytoplankton. Part I: Light limitation and constant temperature. Int. Revue ges. Hydrobiol., 81, 1, 109-139.

Behrenfeld M.J., Falkowski P.G. (1997) Photosynthetic rates derived from satellite-based chlorophyll concentration. Limnology and Oceanography, 42, 1, 1-20.

Belin C. et al. (1994) Characterization by fluorescence of the dissolved organic matter in natural water. Application to fractions obtained by tangential ultrafiltration and XAD resin isolation. Environ. Technology, 14: 1131-1144

Benamou C., Richou M., Benaïm J.Y., Loussert A., Bertholin F., Richou J. (1994) Laser-induced fluorescence of marine sedimentary interstitial dissolved organic matter. Marine Chemistry,  46, 7-23.

Berger P., Laane R.W.P.M., Ilahude A.G., Ewald M., Courtot P. (1984) Comparative study of dissolved fluorescent matter in four West-European estuaries. Oceanologica Acta, 7, 3, 309-314.

Biddanda B., Benner R. (1997) Carbon, nitrogen, and carbohydrate fluxes during the production of particulate and dissolved organic matter by marine phytoplankton. Limnol. Oceanoogr.,  42, 3, 506-518.

Bidigare R. Ondrusek M.E., Morrow J.H., Kiefer D.A (1990) In vivo absorption properties of algael pigments. Ocean Optics X 1302: 290-302; 1990.

Bidigare R.R., Prézelin B.B., Smith R.C (1992) Bio-optical models and the problems of scaling. In: Falkowski P.G., Woodhead A.D. (Ed.) Primary Productivity and Biogeochemical Cycles in the Sea. Plenum Press, New York, 1992.

Bilger W., Schreiber U., Bock M. (1995) Determination of the quantum efficiency of photosystem II and of non-photochemical quenching of chlorophyll fluorescence in the field. Oecologia 102: 425-432

Bisset W.P., Patch J.S., Carder K.L., Lee Z.P. (1997) Pigment packaging and Chl a specific absorption in high-light oceanic waters. Limnol. Oceanogr., 42, 5, 961-968.

Bodenmann R., Schroll H.J. (1996) Compact difference methods applied to initial-boundary value problems for mixed systems. Numer. Math. 73, 291-309.

Boss E., Pegau W.S., Zaneveld J.R.V., Narnhard A.H.B. (1998) Spatial and temporal variability of absorption by disolved material at a continental shelf. SPIE Ocean Optics XIV, 1036-1043.

Brand L.E. (1982) Persistent Diel Rhythms in the Chlorophyll Fluorescence of Marine Phytoplankton Species. Marine Biology, 69, 253-262

Breves W (2001) Bio-Optik im Arabischen Meer: Datenanalyse und Modellierung. Dissertation (PhD Thesis), Institute of Physics, University of Oldenburg, Germany

Breves W, Reuter R (2000) Bio-optical properties of gelbstoff in the Arabian Sea at the onset of the southwest monsoon. Proc. Indian Acad. Sci (Earth Planet. Sci.), 109, 415-425

Bricaud A., Morel A., Prieur L. (1981) Absorption by dissolved organic matter of the sea (yellow substance) in the UV and visible domains. Limnology and Oceanography, 26, 1, 43-53.

Bricaud A., Morel A., Prieur L. (1983) Optical efficiency factors of some phytoplankters. Limnoogy and. Oceanography, 28, 5, 816-832.

Brock J., Sathyendranath S., Platt T. (1993) Modelling the seasonality of subsurface light and primary production in the Arabian Sea. Mar. Ecol. Prog. Ser., 101, 209-221.

Broenkow W.W., Lewitus A:J:, Yarbrough M.A., Krenz R.T. (1983) Particle fluorescence and bioluminescence distributions in the eastern tropical Pacific. Nature, 302, 24, 329-331.

Broenkow W.W., Lewitus A.J., Yarbrough M.A. (1985) Spectral observations of pigment fluorescence in intermediate depth waters of the North Pacific. Journal of Marine Research, 43, 875-891.

Broenkow W.W:, Yuen M.A., Yarbrough M.A. (1992) VERTEX: biological implications of total attenuation and chlorophyll and phycoerythrin fluorescence distributions along a 2000m deep section in the Gulf of Alaska. Deep-Sea Research, 39, 3/4, 417-437.

Brown D.W. A.J. Floyd & M. Sainsbury: Organic Spectroscopy. John Wiley & Sons, Chichester, 250 p., 1988.

Büchel C., Wilhelm C. (1993) In vivo analysis of slow chlorophyll fluorescence induction kinetics in algae: progress, problems and perspectives. Photochemistry and Photobiology, 58, 1, 137-148.

Buma A.G.J., Engelen A.H., Gieskes W.W.C. (1997) Wavelength-dependent induction of thymine dimers and growth rate reduction in the marine diatom Cyclotella sp. exposed to ultraviolet radiaton. Mar. Ecol. Prog. Ser., 153, 91-97.

Burkhardt S., Zondervan I., Rebesell U. (1999) Effect of CO₂ concentration on C:N:P ratio in marine phytoplankton: A species comparison. Limnol. Oceanogr., 44(3), 683-690.

Burkhill P.H., Mantoura R:F:C., Owens N.J.P. (1993) Biogeochemical cycling in the northwestern Indian Ocean: a brief overview. Deep Sea Research II, 40, 3, 643-649.

Carder K.L., Steward R.G., Harvey G.R., Ortner P.B. (1989) Marine humic and fulvic acids: Their effects on remote sensing of ocean chlorophyll. Limnology and Oceanography, 34, 1, 68.81.

Chamberlin W.S., Booth C.R., Kiefer D.A., Morrow J.H., Murphy R.C. (1990) Deep Sea Research, 37, 6, 951-973. Evidence for a simple relationship between natural fluorescence, photosynthesis and chlorophyll in the sea.

Chandrasekhar S. (1960) Radiative transfer. New York: Dover Publications

Chen R.F., Bada J.L. (1992) The fluorescence of dissolved organic matter in seawater. Marine Chemistry, 37, 191-221.

Chen R.F., Bada J.L. (1994) The fluorescence of dissolved organic matter in porewaters of marine sediments. Marine Chemistry, 45, pp31-42.

Chen R.F., Bada J.L., Suzuki Y. (1993) The relationship between dissolved organic carbon (DOC) and fluorescence in anoxic marine porewaters: Implications for estimating benthic DOC fluxes. Geochimica et Cosmochimica Acta,  57, 2149-2152.

Clegg S.L., Whitfield M.(1990) A generalized model for the scavenging of trace metals in the open ocean - I. particle cycling. Deep-Sea Research, 37, 5, 809-832.

Cleveland J.S., Perry M.J. (1994) A model for partioning particulate absorption into phytoplanktonic and detrital components. Deep-Sea Research I, 41, 1 197-221.

Coble P.G., Brophy M.M. (1994) Investigation of the geochemistry of dissolved organic matter in coastal waters using optical properties. SPIE 2258, Ocean Optics XII, 377-391.

Coble P.G., Schultz C.A., Mopper K. (1993) Fluorescence contouring analysis of DOC intercalibration experiment samples: a comparison of techniques. Marine Chemistry, 41, 173-178.

Coble PG (1996) Characterization of marine and terrestrial DOM in seawater using excitation-emission matrix spectroscopy. Marine Chemistry 51, 325-346

Cole J.J., Findlay S., Pace M.L. (1988) Bacterial Production in fresh and saltwater ecosystems: a cross-system overview. Mar. Ecol. Progr. Ser., 43, 1-10.

Cote B., Platt T. (1983) Day-to-day variations in the spring-summer photosynthetic parameters of coastal marine phytoplankton. Limnol. Oceanogr., 28, 2, 320-344.

Cullen J.J. (1990) On models of growth and photosynthesis in phytoplankton. Deep-Sea Research, 37, 4, 667-683.

Cullen J.J., Neale P.J., Lesser M.P. (1992) Biological Weighting Function for hte Inhibition of Phytoplankton Photosynthesis by Ultraviolet Radiation. Science, 258, 646-650.

Cullen J.J., Yang X., MacIntyre H.L. (1992) Nutrient limitation of marine photosynthesis. In: Falkowski P.G., Woodhead A.D. (Ed.) Primary Productivity and Biogeochemical Cycles in the Sea. Plenum Press, New York, 1992.

Cullen, J.J., Yentsch, C.M., Cucci, T.L., MacIntyre, H.L. (1988) Autofluorescence and other optical properties as tools in biological oceanography. SPIE 925, OCEAN OPTICS IX, 149-156.

De Souza Sierra M.M., Donard O.F.X., Lamotte M., Belin C., Ewald M. (1994) Fluorescence spectroscopy of coastal and marine waters. Marine Chemistry 47, 127-144.

Demers S., Therriault J-C., Legendre L., Neveux J. (1985) An in vivo fluorescence method for the continous in situ estimation of phytoplankton photosynthetic characteristics. Marine Ecology Progress Series, 27, 21-27.

Determann S., Reuter R., Wagner P., Willkomm R. (1994) Fluorescent matter in the eastern Atlantic Ocean. Part 1: method of measuremnet and near-surface distribution. Deep-Sea Research I, 41, 4, 659-675.

Determann S., Reuter R., Willkomm R. (1996) Fluorescent matter in the eastern Atlantic Ocean. Part 2: vertical profiles and relation to water masses. Deep-Sea Research I, 43, 3, 345-360.

Determann S., Lobbes J.M., Reuter R., Rullkötter J. (1998) UV fluorescence excitation and emission spectroscopy of marine algae and bacteria. Marine Chemistry 62, 137-156

Dickey T.D. (1991) The emergence of concurrent high resolution physical and bio-optical measurements in the upper ocean and their applications. Reviews of Geophysics, 29, 3, 383-413

Doney S.C., Glover D.M., Najjar R.G. (1996) A new coupled, one-dimensional biological-physical model for the upper ocean: Application to the JGOFS Bermuda Atlantic Timeseries Studie (BATS) site. Deep-Sea Research II, 43, 2-3, 591-624

Dortsch Q., Packard T.T. (1989) Differences in biomass structure betwen oligotrophic and eutrophic marine ecosystems. Deep-Sea Research, 36, 2, 223-240

Duysens LNM, Amesz J (1957) Fluorescence spectrophotometry of reduced phosphopyridine nucleotide in intact cells in the near-ultraviolet and visible region. Biochimica et Biophysica Acta 24, 19-26

Duysens LNM, Sweep G (1957) Fluorescence spectrophotometry of pyridine nucleotide in photosynthesizing cells. Biochimica et Biophysica Acta 25, 13-16

Ebenhöh W., Kohlmeier C., Radford P.J. (1995) The benthic biological submodel in the European Regional Seas Ecosystem Model. Netherlands Journal of Sea Reearch 33(3/4), 423-452.

Efting M.R., Ghiron C.A. (1994) Oxygen fluorescence quenching studies with single tryptophan containing proteins. Journal of Fluorescence, 4, 2, 178-193.

Eisma D (1993) Suspended Matter in the Aquatic Environment. Springer, Berlin, 315 p.

Emery W.J., Meincke J. (1986) Global water masses: summary and review. Oceanologica Acta, 9, 4, 383-391.

Evans R.H., Brown O.B. (1981) Propagation of thermal fronts in the Somali Current System. Deep-Sea Research, 28A, 5, 521-527

Evans GT, Parslow JS (1985): A model of annual plankton cycles, Biol. Oceanogr., 3, 328-347

Falkowski,P.G., Owens T.G. (1980) Light-shade adaptation: two strategies in marine phytoplankton. Plant. Physiol. 66: 592-595

Falkowski P., Kiefer D.A. (1985) Chlorophyll a fluorescence in phytoplankton: relationship to photosynthesis and biomass. Journal of Plankton Research, 7, 5 715-731.

Falkowski PG, Kolber Z (1995) Variations in Chlorophyll Fluorescence Yields in Phytoplankton in the World Oceans. Aust. J. Plant Physiol., 22, 341-355.

Falkowski PG & Woodhead AD (ed.) (1992) Primary Productivity and Biogeochemical Cycles in the Sea. Plenum Press, New York, 550 p.

Faris, GW, Copeland RA (1997) Wavelength Dependence of the Raman Cross Section for Liquid Water. Appl. Opt. 36(12):2686-2688

Farmer F.H., Jarrett O. Jr., Brown C.A. Jr. (1983) Visible absorbance spectra: A basis for in situ and passive remote sensing of phytoplankton concentration and community composition. NASA Technical Paper 2094.

Fasham MJR, Ducklow HW, McKelvie SM (1990) A nitrogen-based model of plankton dynamics in the oceanic mixed layer. J. Mar. Res., 48, 591-639

Fasham M.J.R., Boyd P.W., Savidge G. (1999) Modeling the relative contributions of autotrophs and heterotrophs to carbon flow at a Lagrangian JGOFS station in the Northeast Atlantic: The importance of DOC. Limnol. Oceanogr. 44(1), 80-94.

Fasham M.J.R., Evans G.T. (1995) The use of optimization techniques to model marine ecosystem dynamics at the JGOFS station at 47°N 20°W. Phil. Trans. R. Soc. Lond. B,  348, 203-209.

Ferrari G.M., Mingazzini M. (1995) Synchronous fluorescence spectra of dissolved organic matter (DOM) of algal origin in marine coastal waters. Mar. Ecol. Progr. Ser., 125, 305-315.

Ferrari GM, Dowell MD, Grossi S & Targa C (1996) Relationship between the optical properties of chromophoric dissolved organic matter and total concentration of dissolved organic carbon in the southern Baltic Sea region. Marine Chemistry, 55, 299-316

Fischer J., Grassl H. (1984) Radiative transfer in an atmosphere-ocean system: an azimuthally dependent matrix-operator approach. Applied Optics 23: 1032-1039

Fischer J. et al. (1986) Factor analysis of multispectral radiances over costal and open ocean water based on radiative transfer calculations. Applied Optics 25: 448-456

Flameling I.A., Kromkamp J. (1998) Light dependence of quantum yields for PSII charge separation and oxygen evolution in eucaryotic algae. Limnol. Oceanogr. 43: 284–297

Fortunato A.B., Liviera A. (1999) An adaptive grid technique for the vertical structure of shallow water models. Appl. Math. Modelling 23,  639-650.

Forward R.B.Jr. (1976) Light and diurnal vertical migration: Photobehavior and photophysiology of plankton. Photochemistry and Photobiology, Rev.1, 157-209.

Gardner W.D., Chung S.P., Richardson M.J. Walsh I.D. (1995) The oceanic mixed layer pump. Deep-Sea Research II, 42, 2-3, 757-775.

Gaspar P., Gregoris Y., Levevre J.-M. (1990) A simple eddy kinetic energy model for simulations of the oceanic verticla mixing: Tests at station Papa and long-term upper ocean study site. Journal of Geophysical Research, 95, C9, 16179-16193.

Ge Y., Gordon H., Voss K .(1993) Simulation of inelastic scattering contributions to the irradiance field in the ocean: variation in Fraunhofer line depth. Applied Optics 32: 4028-4036

Geider R.J. (1987) Light and temperature dependence of the carbon to chlorophyll a ratio in microalgae and cyanobacteria: implications for physiology and growth of phytoplankton. New. Phytol., 106, 1-34.

Geider R.J.; MacIntyre H.L., Kana T.M. (1996) A dynamic model of photoadaption in phytoplankton. Limnol. Oceanogr., 41, 1, 1-15.

Geider R.J., MacIntyre H.L., Kana T.M. (1997) A dynamic model of phytoplankton growth and acclimation: responses of thge balanced growth rate and the chlorophyll a: carbon ratio to light, nutrient-limitation and temperature. Mar. Ecol. Prog. Ser., 148, 187-200.

Geider R.J., MacIntyre H.L., Kana T.M. (1998) A dynamic regulatory model of phytoplankton acclimation to light, nutrients and temperature. Limnol. Oceanogr., Vol43, 4, 679-694.

Gieskes W.W.C. (1991) Algal pigment fingerprints: Clue to taxon-specific abundance, productivity and degradation of phytoplankton in seas and oceans. In: S. Demers (Hrsg.) Particle Analysis in Oceanography. NATO ASI Series,  G27, 61-99. Springer-Verlag Berlin, Heidelberg.

Gieskes W.W., Kraay G.W. (1983) Unknown chlorophyll a derivatives in the North Sea and the tropical Atlantic Ocean revealed by HPLC analysis. Limnol. Oceanogr.,  28, 4, 757-766.

Gordon H.R. (1979). Diffuse reflection of the ocean: the theory of its augmentation by chlorophyll a fluorescence at 685nm. Applied Optics 18: 1161-1166

Gordon H.R. (1989) Can the Lambert-beer law be applied to the diffuse attenuation coefficient of ocean water? Limnology and Oceanography, Vol 34, 8, 1389-1409.

Gordon H.R. (1989) Dependence of the diffuse reflectance of natural waters on the sun angle. Limnology and Oceanography, Vol 34, 8, 1484-1489.

Gordon H.R. (1993) Sensitivity of radiative transfer to small-angle scattering in the ocean: Quantitative assessment. Applied Optics, 32, 36, 7505-7511.

Gordon H.R.., Boynton G. (1997) Radiance-irradiance inversion algorithm for estimating the absorption and backscattering coefficients of natural waters: homogenous waters. Applied Optics 36: 2636-2641

Govindjee (1995) Sixty years since Kautski: Chlorophyll a fluorescence. Aust J Plant Physiol 22, 131-160

Grant I., Hunt G. (1969) Discrete space theory of radiative transfer I. Fundamentals. Proceedings of the Royal Society of London A313: 183-197

Grant I., Hunt G. (1969) Discrete space theory of radiative transfer II. Stability and non-negativity. Proceedings of the Royal Society of London A313: 199-216

Green S.A., Blough N.V. (1994) Optical absorption and fluorescence properties of chromophoric dissolved organic mater in natural waters. Limnology and Oceanography, 39, 8, 1903-1916.

Gregg W.W., Carder K.L. (1990) A simple spectral solar irradiance model for cloudless maritime atmospheres. Limnology and Oceanography, 35, 8, 1657-1675.

Haake B., Ittekot V., Rixen T., Ramaswamy V.,Nair R.R., Curry W.B. (1993) Seasonality and interannual variability of particle fluxes to the deep Arabian Sea. Deep-Sea research I, 40, 8, 1323-1344.

Hallegraef G.M. (1981) Seasonal Study of Phytoplankton Pigments and Species at a Coastal Station off Sydney: Importance of Diatoms and the Nanoplankton. Marine Biology 61, 107-118.

Haltrin V., Kattawar G. (1993) Self-consistent solutions to the equation of transfer with elastic and inelastic scattering in oceanic optics: I. Model. Applied Optics 32: 5356-5367

Haltrin V.I. (1998) Self-consistent approach to the solution of the light transfer problem for irradiances in marine waters with arbitrary turbidity, depth, and surface illumination. I Case of absorption and elastic scattering. Appl. Optics, 37, 18, 3773-3784.

Haltrin V.I. (1998) One-parameter model of sea water optical properties. SPIE Ocean Optics XIV, 1008-1007.

Hawes S.K., Carder K.L., Harvey G. (1992) Quantum fluorescence efficiencies of fulvic and humic acids: effects on ocean color and fluorometric detection. SPIE 1750, Ocean Optics XI, 212-223.

Hayase K., Shinozuka N. (1995) Vertical distribution of fluorescent organic matter along with AOU and nutrients in the equatorial Central Pacific. Marine Chemistry, Vol48., 283-290.

Hayase K., Tsubota H. (1985) Sedimentary humic acid and fulvic acid as fluorescent organic materials. Geochemica et Cosmochemica Acta, 49, 159-163.

Hedges J.I. et al. (2000) The molecularly-uncharacterized component of nonliving organic matter in natural environments. Org. Geochem. 31: 645-958

Herbland A. (1978) The soluble fluorescence in the open sea. J. exp. mar. Biol. Ecol., 32, 275-284.

Hedges JI, Eglinton G, Hatcher PG, Kirchman DL, Arnosti C, Derenne S, Evershed RP, Kögler-Knaber I, de Leeuw JW, Littke R, Michaelis W & Rullkötter J (2000) The molecularly-uncharacterized component of nonliving organic matter in natural environments. Organic Geochemistry 31, 945-958

Herndl G.J., Müller-Niklas G., Frick J. (1993) Major role of ultraviolet-B in controling bacterioplankton growth in the surface layer of the ocean. Nature, 361, 717-718.

Heuermann R., Loquay K.D., Reuter R. (1995) A multi-wavelength in situ fluorometer for hydrographic measurements. EARSeL Advances in Remote Sensing, 3, 71-77.

Hilton J., Rigg E., Jaworsci G. (1989) Algal identification using in vivo fluorescence spectra. J. Plankton Res. 11: 65-74

Højerslev, N.K. (1975) A spectral light absorption meter for measurements in the sea. Limnol. Oceanogr., 20(6): 1024-1034

Højerslev N., Zaneveld J. (1977) A theoretical proof of the existence of the submarine asymptotic daylight field. Institut Report Series, Koebenhavn Universitet, Institut for Fysisk Oceanografi 34: 1-16

Hoepffner N., Sathyendranath S. (1991) Effect of pigment composition on absorption properties of phytoplankton. Mar. Ecol. Prog. Ser. 73: 11-23

Howell E.A., Doney S.C., Fine R.A., Olson D.B. (1997) Geochemical estimates of denitrification in the Arabian Sea and the Bay of Bengal during WOCE. Geophysical research Letters, 24, 21, 2549-2552.

Hu C & Voss KJ (1997) In situ measurements of Raman scattering in clear ocean water. Applied Optics, 36, 6962-6967

Hurtt GC, Armstrong RA (1996) A pelagic ecosystem model calibrated with BATS data, Deep-Sea Res. II, 43, 653-683

Iqbal M. (1983) An introduction to solar radiation. Academic Press, Canada.

Ishiwatari R (1992) Macromolecular material (humic substance) in the water column and sediments. Marine Chemistry, 39, 151-166

Itturriaga R. (1992) Effect of bacterial colonization on the absorption and fluorescence properties of detrital particulates. SPIE 1750 Ocean Optics XI, 201-211.

Ishiwatari R. (1992) Macromalecular material (humic substance) in the water column and sediments. Marine Chemistry, 39, 151-166.

Jeffrey S.W., Humphrey G.F. (1975) New spectrophotometric equations for determining chlorophylls a, b, c1and c2 in higher plants, algae and natural Phytoplankton. Biochemical Physiology Plazen 167: 191-194

Jeffrey S.W., Hallegraeff G.M. (1980) Studies of Phytoplankton Species and Photosynthetic Pigments in a Warm Core Eddy of the East Australian Current. II. A Note on Pigment Methodology. Mar. Ecol. Prog. Ser., 3, 295-301.

Jin Z., Stamnes K. (1994) Radiative transfer in nonuniformly refracting layered media: atmosphere-ocean system. Applied Optics 33: 431-442

Johnson G., Nelson N.B., Jovine R.V.M., Prezelin B.B. (1994) Chromoprotein- and pigment-dependent modeling of spectral light absorption in two dinoflagellates, Prorocentrum minimum and Heterocapsa pygmaea. Mar. Ecol. Prog. Ser., 114, 245-258.

Johnson G., Sakshaug E. (1996) Light Harvesting in bloom-forming marine phytoplankton: species-specificity and photoacclimation. Sci. Mar. 60: 47-56

Kaitala S., Babichenko S., Poryvkina L., Leeben A. (1994) Fluorescent Analysis of Pigment Composition of Natural Phytoplankton. Marine Technology Society Journal 28: 50-58

Kalle K. (1949) Fluoreszenz und Gelbstoff im Bottnischen und Finnischen Meerbusen. Deutsche Hydrographische Zeitschrift, 2, 117-124.

Kalle K. (1963) Über das Verhalten und die Herkunft der in den Gewässern und in der Atmosphäre vorhandenen himmelblauen Fluoreszenz. Deutsche Hydrographische Zeitschrift, 16, 153-166.

Kalle K. (1966) The problem of the gelbstoff in the sea. Oceanography and Marine Biology Annual Rev., 4: 91-104

Karabashev G.S., Agatova A.I. (1984) Relationship of fluorescence intensity to concentration of dissolved organic substances in ocean water. Oceanology, 24, 6, pp680-682.

Kattawar G., Xu X. (1992) Filling in of Fraunhofer lines in the ocean by Raman scattering. Applied Optics 31: 6491-6500

Keen T.R., Kindle J.C., Young D.K. (1997) The interaction of southwest monsoon upwelling, advection and primary production in the northwest Arabian Sea. Journal of Marine Systems, 13, 61-82.

Kieber R.J., McDaniel J., Mopper K. (1989) Photochemical source of biological substrates in sea water: implications for carbon cycling. Nature, 341, 637-639

Kieber RJ, Zhou X, Mopper K (1990) Formation of carbonyl compounds from UV-induced photodegradation of humic substances in natural waters: Fate of riverine carbon in the sea. Limnology and Oceano­graphy, 35, 1503-1515

Kiefer D.A. (1973) Fluorescence Properties of Natural Phytoplankton Populations. Marine Biology, 22, 263-269.

Kiefer D.A. (1973) Chlorophyll a Fluorescence in Marine Centric Diatoms: Responses of Chloroplasts to Light and Nutrient Stress. Marine Biology, 23, 39-46.

Kiefer D.A., Chamberlin W.S., Booth C.R. (1989) Natural fluorescence of chlorophyll a: Relationship to photosynthesis and chlorophyll concentration in the western South Pacific gyre. Limnology and Oceanography,  34, 5, 868-881.

Kiefer D.A., Reynolds R.A. (1992) Advances in understanding phytoplankton fluorescence and photosynthesis. In: Falkowski P.G., Woodhead A.D. (Ed.) Primary Productivity and Biogeochemical Cycles in the Sea. Plenum Press, New York, 1992.

Kiefer D.A., Mitchell B.G. (1983) A simple, steady state description of phytoplankton growth based on absorption cross section and quantuum efficienccy. Limnol. Oceanogr.; 28, 4, 770-776.

Kiefer D.A., Soohoo J.B.(1982) Spectral absorption by marine particles of coastal waters of Baja California. Limnol. Oceanogr., 27, 3, 492-499.

Kirk J.T.O. (1989) The upwelling light stream in natural waters. Limnology and Oceanography, Vol 34, 8, 1410-1425.

Kirk J. (1991) Volume scattering function, average cosine, and the underwater light field. Limnology and Oceanography 36: 455-467

Kirk J.T.O. (1994) Light and Photosynthesis in Aquatic Ecosystems. Cambridge University Press, 509 pp.

Kishino M., Booth C.R., Okami N. (1984) Underwater radiant energy absorbed by phytoplankton, detritus, dissolved organic matter, and pure water. Limnol. Oceanogr.,  29, 2, 340-349.

Kishino M., Takahashi M., Okami N., Ichimura S. (1985) Estimation of the spectral absorption coefficients of phytoplankton in the sea. Bulletin of Marine Science, 37, 2, 634-642.

Kohlmeier C., Ebenhöh W. (1995) The stabilizing role of cannibalism in a predator-prey system. Bulletin of Mathematical Biology, 57, 3, 401-411.

Kolber Z., Falkowski P.G. (1993) Use of active fluorescence to estimate phytoplankton photosynthesis in situ. Limnology and Oceanography, 38, 8, 1646-1665.

Kouassi A.M., Zika R.G., Plane J., Gidel L. (1985) Photochemical Modeling of marine humus fluorescence in the ocean. Eos, 66, 51, p.1266.

Kouassi A.M., Zika R.G. (1990) Light induced alteration of the photophysical properties of dissolved organic matter in seawater. Part I. Photoreversible properties of natural waters fluorescence. Netherlands Journal of Sea Research 27(1), 25-32.

Kouassi A.M., Zika R.G., Plane J.M.C. (1990) Light induced alteration of the photophysical properties of dissolved organic matter in seawater. Part II. Estimates of the environmental rates of the natural water fluorescence. Netherlands Journal of Sea Research 27(1), 33-41.

Kramer C.J.M. (1979) Degradation by sunlight of dissolved fluorescing substances in the upper layers of the eastern Atlantic Ocean. Netherlands Journal of Sea Research, 13, 2, 325-329.

Krause GH, Weis E (1991) Chlorophyll fluorescence and photosynthesis: The basics. Annual Review of Plant Physiology and Plant Molecular Biology 42, 313-349

Krause-Jensen D., Sand-Jensen K. (1998) Light attenuation and photosynthesis of aquatic plant communities. Limnol. Oceanogr., 43, 3, 396-407.

Krol T., Lotocka M. (1994) Light attenuation on unicellular marine phytoplankton. SPIE, 2258. Ocean Optics XII, 134-139.

Kühn W. (1994) A one-dimensional nitrogen-based physical-biological model of the pelagic ecosystem. Institut für Meereskunde der Universität Hamburg, Technical Report 14.

Kumar M.D., Rajendran A., Somasundar K., Haake B., Jenisch A., Shuo Z., Ittekot V. Desai B.N. (1990) Dynamics of dissolved organic carbon in the north Indian Ocean. Marine Chemistry 31, 299-316.

Kyewalyanga M., Platt T., Sathyendranath S. (1992) Ocean primary production calculated by spectral and broad-banded models. Marine Ecology Progress Series, 85, 171-185.

Laane R.W.P.M. 81982) Influence of pH on the fluorescence of dissolved organic matter. Marine Chemistry, 11, 395-401.

Lakovich J. (1986) Principles of fluorescence spectroscopy. Plenum Press, New York - London.

Langdon C. (1988) On the causes of interspecific differences in the growth-irradiance relationship for phytoplankton. II. A general review. Journal of Plankton Research, 10, 6, 1291-1312.

Lawson L.M., Hofmann E.E., Spitz Y H. (1996) Time series sampling and data assimilation in a simple marine ecosystem model. Deep-Sea Research II, 43, 2-3, 625-651.

Lee C., Wakeham S.G. (1992) Organic matter in the water column: future research challenges. MarineChemistry, 39, 95-118.

Lee Z., Carder K.L., Mobley C.D., Steward R.G., Patch J.S. (1998) Hyperspectral remote sensing for shallow waters. I. A semianalytical model. Applied Optics, 37, 27, 6329-6338.

Legendre L., Le Fèvre J. (1991) From individual plankton cells to pelagic marine ecosystems and to global biogeochemical cycles. In: Demers S. (Ed.) Particle Analysis in Oceanography. Springer-Verlag Berlin Heidelberg, 1991.

Lewitus A.J., Broenkow W.W. (1985) Intermediate depth pigment maxima in oxygen minimum zones. Deep-Sea Research, 32, 9, 1101-1115.

Lindell M.J., Graneli W., Tranvik L.J. (1995) Enhanced bacterial growth in response to photochemicl transformation of dissolved organic matter. Limnol. Oceanogr.,  40, 1; 195-199.

Llewelyn C.A., Mantoura R.F.C., Brereton R.G. (1990) Products of chlorophyll photodegradation - 1. Detection and separation. Photochemistry and Photobiology, 52,  5, 1037-1041.

Llewelyn C.A., Mantoura R.F.C., Brereton R.G. (1990) Products of chlorophyll photodegradation - 2. Structural Identification. Photochemistry and Photobiology, 52,  5, 1043-1047.

Loisel H., Morel A. (1998) Light scattering and chlorophyll concentration in case 1 waters: A reexamination. Limnol. Oceanogr., 43, 5, 847-858.

Lorenzen C.J. (1966) A method for the continous measurement of in vivo chlorophyll concentration. Deep Sea Research, 13, 223-227.

Lorenzen C.J. (1967) Vertical distribution of chlorophyll and phaeo-pigments: Baja California. Deep-Sea Research, 14, 735-745.

Lorenzen C.J., Jeffrey S.W. (1980) Determination of chlorophyll in seawater. Report of intercalibration tests. Unesco technical papers in marine science 35

Lorenzen C.J., Welschmeyer N.A., Copping AE., Vernet M. (1983) Sinking rates of organic particles. Limnol. Oceanogr., 28, 4, 766-769.

Louda J.W., Baker E.W. (1986) The biogeochemistry of chlorophyll. In: Sohn M.L. (Ed.) Organic Marine Geochemistry. ACS Symposium Series 305.

Lundsgaard C., Olesen M. (1997) The origin of sedimenting detrital matter in a coastal system. Limnol. Oceanogr., 42,  5, 1001-1005.

Lutz V.A., Sathyendranath S., Head E.J.H. (1996) Absorption coefficient of phytoplankton: regional variations in the North Atlantic. Mar Ecol Prog Ser, 135, 197-213.

MacCaull W.A., Platt T. (1977) Diel variations in the photosynthetic parameters of coastal marine phytoplankton. Limnol. Oceanogr., 22, 4, 723-731.

Maffione R.A., Dana D.R. (1997) Instruments and methods for measuring the backward-scattering coefficient of ocean waters. Applied Optics, 36(24), 6057-6067

Maier-Reimer E., Six K.D. (1996) Effects of plankton dynamics on seasonal carbon fluxes in an ocean general circulation model. Global Biogeochemical Cycles, 10, 4, 559-583.

Marangoni R., Cubeddu R., Taroni P., Valentini G., Sorbi R., Lorenzini E., Colombetti G. (1996) Microspectrofluorometry, fluorescence imaging and confocal microcopy of an endogenous pigment of the marine ciliate Fabrea Salina. Journal of Ohotochemistry and Photobiology B: Biology, 34, 183-189.

Marangoni R., Gobbi L., Verni F., Albertini G., Colombetti G. (1996) Pigment granules and hypericin-like fluorescence in the marine ciliate Fabrea Salina. Acta Protozoologica, 35, 177-182.

Marra J. (1992) Diurnal variability in chlorophyll fluorescence: Observations and modeling. SPIE, 1750, OCEAN OPTICS XI, 233-244.

Marshall B., Smith R. (1990) Raman scattering and in-water optical properties. Applied Optics 29: 71-84

Martin J.H., Knauer G.A., Karl D.M., Broenkow W.W. (1987) VERTEX: carbon cycling in the northeast Pacific. Deep-Sea Research, 34, 2, 267-285.

Mayer L.M., Schick L.L., Loder III T.C. (1999) Dissolved protein fluorescence in two Maine estuaries. Marine Chemistry, 64, 171-179.

McCarthy MD, Hedges JI & Benner R (1993) The chemical composition of dissolved organic matter in seawater. Chemical Geology, 107, 503-507

McCormick N. J., Rinaldi G. E. (1989) Seawater optical property estimation from in situ irradiance measurements. Applied Optics 28: 2605-2613

McCormick N. J., Hoejerslev N. K. (1994) Ocean optics attenuation coefficients: local versus spatially averaged . Applied Optics 33: 7067-7069

McCormick N. J., Francisco P. W. (1995) Radiative transfer two-stream shape factors for ocean optics. Applied Optics 34: 6248-6255

Mellor G.L., Yamada T. (1982) Development of a turbulence closure model for geophysical fluid problems. Reviewes of Geophysics and Space Physics, 20, 4, 851-875.

Meyns S., Illi R., Ribi B. (1994) Comparison of chlorophyll-a analysis by HPLC and spectrophotometry: Wher do the differendes come from? Arch. Hydriobiol., 132, 2,  129-139

Milchers W, Patsayeva S, Reuter R, Willkomm R (1998) Airborne laser fluorosensing of maritime parameters: application of geostatistics. EARSeL Yearbook 1997. Paris 1998

Miller W.L., Moran M.A. (1997) Interaction of photochemical and microbial processes in the degradiation of refractory dissolved organic matter from a coastal marine environment. Limnology and Oceanography,  45, 6, 1317-1324.

Milne PJ & Zika RG (1989) Luminescence quenching of dissolved organic matter in seawater. Marine Chemistry, 27, 147-164

Mitchell B.G., Kiefer D.A. (1988) Variability in pigment specific particulate fluorescence and absorption spectra in the northeastern Pacific Ocean. Deep-Sea Research, 35, 5, 665-689.

Mitchell B.G., Kiefer D.A. (1988) Chlorophyll a specific absorption and fluorescence excitation spectra for ligth-limited phytoplankton. Deep-Sea Research, 35, 5, 639-663.

Mittenzwey KH, Reuter R (1995) Correlations between COD, DOC, UV254 and fluorescence of inland waters measured in the laboratory. EARSeL Advances in Remote Sensing 3, 57-65

Mittenzwey K.-H., Reuter R., Gitelson A. (1996) Analysis of dissolved humic substances in eutrophic waters using the fluorescence of natural samples: Calculations and experiments. Int. Revue ges. Hydrobiol., 81, 1, 1-12.

Mobley C.D., Gentili B. Gordon H.R., Zhongai J., Kattawar G.W., Morel A., Reinersman P., Stamnes K., Stavn R.H. (1993) Comparison of numerical models for computing underwater light field. Appl. Optics, 32, 36.

Mobley C. (1994). Light and water: radiative transfer in natural waters. Academic Press, Inc., London.

Mobley C.D. (1989) A numerical model for the computation of radiance distributions in natural waters with wind roughened surfaces. Limnology and Oceanography, 34, 8, 1473-1483

Mobley CD, Gentili B, Gordon HR, Jin Z, Kattawar GW, Morel A, Reinersman P, Stamnes K, Stavn RH (1993) Comparison of numerical models for computing underwater light fields, Appl. Optics, 32, 7484-7504

Mobley C.D, Stramski D. (1997) Effects of microbial particles on oceanic optics: Methology for radiative transfer modeling and example simulations. Limnol. Oceanogr., 42, 3, 550-560

Mopper K., Schultz C.A. (1993) Fluorescence as a possible tool for studying the nature and water column distribution of DOC components. Marine Chemistry, 41, 229-238.

Mopper K., Zhou X. (1990) Hydroxyl radical photoproduction in the sea and its potential impact on marine processes. Science, 250, 661-664.

Mopper K., Zhou X., Kieber R.J., Kieber D.J., Sikorski R.J., Jones R.D. (1991) Photochemical degradation of dissolved organic carbon and its impact on the oceanic carbon cycle. Nature, 353, 60-63.

Moran M.A., Zepp R.G. (1997) Role of photoreaction in the formation of biologically labile compounds from dissolved organic matter. Limnology and Oceanography, 42, 6, 1307-1316.

Morel A. (1974) Optical properties of pure water and pure sea water. In: Jerlov N.G., Nielsen E.S. eds. Optical Aspects of Oceanography. London: Academic Press; pp. 1-24.

Morel A. (1978) Available, usable, and stored radiant energy in relation to marine photosynthesis. Deep-Sea Research, 25, 673-688.

Morel A. (1980) In-water and remote measurements of ocean color. Boundary Layer Meteorology 18, 177-201.

Morel A., Bricaud A. (1981) Theoretical results concerning light absorption in a discrete medium, and application to specific absorption of phytoplankton. Deep-Sea Research, 28A, 11, 1375-1393.

Morel A. (1988) Optical Modeling of the upper ocean in relation to its biogenous matter content (Case I waters). Journal of geophysical Research, 93, C9, 10.749-10.768.

Morel A., Berthon J.-F. (1989) Surface pigments, algal biomass profiles, and potential production of the euphotic layer. Relationship reinvestigated in view of remote-sensing applications. Limnology and Oceanography, Vol 34, 8, 1545-1562.

Morel A., Ahn Y.-H. (1990) Optical efficiency factors of free living marine bacteria: Influence of bacterioplankton upon the optical properties and particulate organic carbon in oceanic waters. Journal of Marine Research, 48, 145-175

Morel A. (1991) Light and marine photosynthesis: a spectral model with geochemical and climatological implications. Prog. Oceanog. 26, 263-306

Morel A, Antoine D (1994) Heating rate within the upper ocean in relation to its bio-optical state, J. Phys. Oceanogr., 24, 1652-1665

Morel A., Antoine D., Babin M., Dandonneau Y. (1996) Measured and modeled primary production in the northeast Atlantic (EUMELI JGOFS program) the impact of natural variations in photosynthetic parameters on model predictive skill. Deep-Sea Research I, 43, 8, 1273-1304.

Morel A., Smith R.C. (1974) Relation between total quanta and total energy for aquatic photosynthesis. Limnol. Oceanogr., 19, 4, 591-600.

Morel A., Prieur L. (1977) Analysis of variations in ocean color. Limnol. Oceanogr., 22, 4, 709-722.

Morel A (1991) Optics of marine particles and marine optics. In: S Demers (Ed.) Particle Analysis in Oceanography. NATO ASI Series Vol G 27. Springer, Berlin, 1991, pp. 141-188

Morrow J.H., Chamberlin W.S., Kiefer D.A. (1989) A two component description of spectral absorption by marine particles. Limnology and Oceanography, Vol 34, 8, 1500-1509.

Naqvi W.A. (1991) Geographical extent of denitrification in the Arabian Sea in relation to some physical processes. Oceanologica Acta, 14, 3,  281-290.

Nelson J.R. (1989) Phytoplankton pigments in macrozooplankton feces: variability in carotenoid alterations. Mar. Ecol. Progr. Ser., 52, 129-144.

Nelson J.R. (1993) Rates and possible mechanism of light dependent degradation of pigments in detritus derived from phytoplankton. Jornal of Marine Research, 51, 155-179.

Nelson J.R. (1993a) Detrital spectral absorption: Laboratory Studies of visible light effectss on phytodetritus absorption, bacterial spectral signal, and comparison to field measurements. Journal of Marine Research, 51, 181-207.

Nicklisch A. (1998) Growth and light absorption of some planktonic cyanobacteria, diatoms and chlorophycaea under simulated natural light fluctuations. Journal of Plankton Research, 20, 1, 105-119.

Nieke B., Reuter R., Heuermann R., Wang H., Babin M., Therriault J.C. (1997) Light absorption and fluorescence properties of chromophoric dissolved organic matter (CDOM), in the St. Lawrence Estuary (Case 2 waters). Continental Shelf Research, 17, 3, 235-252.

Noye J. (1984) Finite differences techniques for partial differential Equations. In: Noye J. (1984) Computaional techniques for diferntial equations. Elsevier Science Publishers B.V. North Holland, Mathematics Studies 83,  95-330.

Noye J. (1987): Numerical methods for solving the transport equation. In: J. Noye (1987) Numerical modelling: Applications to marine systems. Elsevier Science Publishers B.V. North Holland,  195-230.

Noye J. (1987) Finite differnce methods for solving the one-domensional transport equation. In: J. Noye (1987) Numerical modelling: Applications to marine systems. Elsevier Science Publishers B.V. North Holland,  231-256.

Olaizola M., Geider E. et al. (1996) Synoptic study of variations in the fluorescence-based maximum quantum efficiency of photosynthesis across the North Atlantic Ocean. Limnology and Oceanography 41: 755-765

Olbers D. (1989) A geometrical interpretation of inverse problems. In: Anderson D.L.T., Willebrandt J. (Ed.) Oceanic circulation models: Combining Data and Dynamics, 79-93. Kluwer Academic Publishers.

O´Mongain E., Buckton D., Green S. (1997) Spectral absorption coefficient measured in situ in the North Sea with a marine radiometric spectrometer system. Applied Optics 36: 5162-5167

Owens T.G. (1991) Energy transformation and fluorescence in photosynthesis. In: Demers S. (Ed.) Particle Analysis in Oceanography. NATO ASI Series Vol G 27. Springer, Berlin, 1991, pp. 101-140

Parlanti A, Belin C, Patsayeva S, Ewald M & Lamotte M (1998) Inerpretation of the fluorescence signature of marine, coastal and estuarine waters. In: EARSeL Workshop on Lidar Remote Sensing of Land and Sea, Workshop Proceedings, p. 47-50, S. Babichenko & R. Reuter (editors), Paris 1998

Patsayeva S. (1995) New methodological aspects of the old problem: laser diagnostics of dissolved organic matter. EARSeL Advances in Remote Sensing. 3(3): 66-70.

Paulson C., Simpson J.J. (1977) Irradiance measurements in the upper ocean. Journal of Physical Oceanography, 7, 952-957.

Pao C.V. (1998) Accelerated monotone iterative methods for finite difference equations of reaction diffusion. Numer. Math. 79, 261-281.

Pech-Pacheco J.L., Alvarez-Borrego J. (1998) Optical-digital system applied to the identification of five phytoplankton species. Mar. Biol. 132, 357-365.

Pegau WS, Gray D & Zaneveld JRV (1997) Absorption and attenuation of visible and near-infrared light in water: dependence on temperature and salinity. Applied Optics, 36, 6035-6046

Plass G., Kattawar G. et al. (1973) Matrix operator theory of radiative transfer. 1: Rayleigh scattering. Applied Optics 12: 314-329

Platt T. (1986) Primary Production of he ocean water column as afunction of surface light intensity: algorithms for remote sensing. Deep-Sea Research, 33, 2, 149-163.

Platt T., Rao D.V.S., Irwin B. (1983) Photosynthesis of Picoplankton in the Oligotrophic Ocean. Nature, 301, 702-704.

Platt T., Sathyndranath S., Caverhill C.M., Lewis M.R. (1988) Ocean primary production and available light: further algorithms for remote sensing. Deep-Sea Research, 35, 6, 855-879.

Platt T., Harrison W.G., Lewis M.R., Li W.K.W., Sathyendranath S., Smith R.E., Vezina A.F. (1989) Biological production of the oceans: the case for a consensus. Mar. Ecol. Prog. Ser., 52, 77-88.

Pope R.M, Fry E.S. (1997) Absorption spectrum (380-700nm) of pure water. II. Integrating cavity measurements. Appl. Optics, 36, 33, 8710-8723.

Porto S. (1966) Angular dependence and depolarisation ratio of the Raman effect. Journal of the Optical Society of America 56: 1585-1589

Poryvkina L., Babichenko S., Kaitala S., Kuosa H. and Shalapjonok A. (1994) Spectral fluorescence signatures in characterization of phytoplankton community composition. Journal of Plankton Research 16(10): 1315-1327

Poryvkina L, Babichenko S & Leeben A (2001) Analysis of phytoplankton pigments by excitation spectra of fluorescence. In: Lidar Remote Sensing of Land and Sea, R. Reuter (editor), EARSeL eProceedings No.1, 224-231

Postma H., Manuels M.W., Rommetss J.W. (1976) Breakdown and production of fluorescent substances in Dutch waters. Netherlands Journal of Sea Research, 19, 4, 499-516.

Pozdnyakov D, Grassl H & Petterson L (2002) Numerical modelling of transspectral processes in natural waters: implications for remote sensing. Int J Remote Sensing 23, 1581-1607

Preisendorfer R. W., Mobley C. D. (1984) Direct and inverse irradiance models in hydrologic optics. Limnology and Oceanography 29: 903-929

Prieur L., Sathyendranath S. (1981) An optical classification of coastal and oceanic waters based on the specific spectral absorption curves of phytoplankton pigments, dissolved organic matter, and other particulate materials. Limnology and Oceanography, 26, 4, 671-689.

Ravisankar M., Reghunath A.T., Sathianandan K., Nampoori V.P.N. (1988) Effects of dissolved NaCl, MgCl2 and Na2SO4 in seawater on the optical attenuation in the region from 430 to 630 nm. Applied Optics, 27:3887-3894

Redheffer R. (1962) On the relation of transmission-line theory to scattering and transfer. Journal of Mathematics and Physics 41: 1-41

Reuter R. (1980) Characterization of marine particle suspensions by light scattering. I Numerical predictions from Mie theory. Oceanologica Acta 3: 317-324;. II. Experimental results. Oceanologica Acta 3: 325-332

Roesler C.S., Perry M.J., Carder K.L. (1989) Modeling in situ phytoplankton absorption from total absorption spectra in productive inland marine waters. Limnology and Oceanography, Vol 34, 8, 1510-1523

Roesler C., Zanefeld J. R. (1995) In situ methods for measuring the inherent optical properties of ocean waters. Limnology and Oceanography 40: 393-410

Qasim S.Z. (1982) Oceanography of the northern Arabian Sea. Deep-Sea Research, 29,  9A, 1041-1068.

Rao R.R., Mathew B., Kumar P.V.H. (1993) A summary of results on thermohaline variability in the upper layers of the east central Arabian Sea and Bay of Bengal during summer monsoon experiments. Deep-Sea Research I, 40, 8, 1647-1672.

Romankevich E.A. (1984) Geochemistry of organic matter in the ocean. Springer Verlag Berlin Heidelberg.

Rykiel E.J. Jr. (1996) Testing ecological models: the meaning of validation. Ecological Modelling, 90, 229-244.

Salzman GC, Brito Singham S, Johnston RG & Bohren CF (1991) Light scattering properties of cells. NATO ASI Series, Vol G 27, (S Demers, editor), Springer, Berlin, pp. 189-209

Sathyendranath S., Lazzara L., Prieur L. (1987) Variations in the spectral values of specific absorption of phytoplankton. Limnol. Oceanogr., 32, 2, 403-415.

Sathyendranath S., Platt T. (1989) Computaion of aquatic primary production: Extended formalism to include effct of angular and spectral distribution of light. Limnology and Oceanography, 34, 1, 188-198.

Sathyendranath S.,Platt T., Caverhill C.M., Warnock R.E., Lewis M.R. (1989) Remote sensing of ocean primary production: computations using a spectral model. Deep-Sea Research, 36, 3, 431-453.

Sathyendranath S, Platt T, Stuart V, Irwin BD, Veldhuis MJW, Kraay GW & Harrison WG (1996) Some bio-optical characteristics of phytoplankton in the NW Indian Ocean. Mar. Ecol. Prog. Ser., 132, 299-311.

Sathyendranath S & Platt T (1997) Analytic model of ocean color,. Applied Optics, 36, 2620-2629

Schmid H., Stich H.B. (1995) HPLC-analysis of algal pigments: comparison of columns, column properties and eluents. Journal of Applied Phycology, 7, 487-494.

Simpson JJ, Dickey TD (1981) Alternative Parametrizations of downward irradiance and their dynamical significance. J. Phys. Oceanogr., 11, 876-882

Schröter J. (1989) Driving of non-linear time-dependent ocean models by observation of transient tracers - A problem of constrained optimisation. In: Anderson D.L.T., Willebrandt J. (Ed.) Oceanic circulation models: Combining Data and Dynamics, 257-285. Kluwer Academic Publishers.

Seritti A., Morelli E., Nannicini L., Giambelluca A., Scarano G. (1994). Fluorescence emission characteristics of naturally occurring organic matter in relation to metal complexation studies. The Science of the Total Environment,  148, 73-81.

Seritti A., Morelli E., Nannicini L., Del Vecchio R. (1994) Production of hydrophobic fluorescent organic matter by the marine diatom phaeodactylum tricornutum. Cemosphere, 28, 1, 117-129.

Sieburth J. McN., Jensen A. (1968) Studies on algal substances in the sea. I. Gelbstoff (Humic Material) in terrestrial and marine waters. J.exp.mar.Biol.Ecol., 2, 174-189.

Sieburth J. McN., Jensen A. (1969) Studies on algal substances in the sea. II. The formation of gelbstoff (Humic Material)by exudates of phaeophytas. J.exp.mar.Biol.Ecol., 3, 275-289.

Siegel D.A., Dickey T.D. (1987) Observations of the vertical structure of the diffuse attenuation coefficient spectrum. Deep-Sea Research, 34, 4, 547-563.

Sidorenko V.M., Pakkonen S.A. (1994) Intensity of the water fluorescence variation caused by organic matter transition from suspenden state into solution. SPIE, 2258. Ocean Optics XII, 793-796.

Sidorenko V.M., Pakkonen S.A. (1994) Vertical stratification of the fluorescence intensity dissolved in the sea water organic water. SPIE, 2258. Ocean Optics XII, 806-810.

Sidorenko V.M., Pakkonen S.A. (1995) Vertical stratification of fluorescence intensity of organic matter in the Black Sea. Oceanology, English Translation, 35, 2, 186-188.

Siegel D.A., Dickey T.D. Washburn L., Hamilton M.K., Mitchell B.G. (1989) Optical determination of particulate abundance and production variations in the ologotrophic ocean. Deep-Sea Research, 36, 2, 211-222.

Sieracki M.E., Sieburth J. McN. (1986) Sunlight induced growth delay of planktonic marine bacteria in filtered seawater. Mar. Ecol. Progr. Ser., 33, 19-27.

Slusher R., Derr V. (1975) Temperature dependence and cross section of some Stokes and anti-Stokes Raman lines in ice Ih. Applied Optics 14: 2116-2120

Simpson J.J., Dickey T.D. (1981) Alternative Parametrizations of downward irradiance and their dynamical significance. Journal of Physical Oceanography, 11, 876-882.

Skoog A, Wedborg A & Fogelqvist E (1996) Photobleaching of fluorescence and the organic carbon concentration in a coastal envorinment. Marine Chemistry 55, 333-345

Smart P.L., Finlayson B.L., Rylands W.D., Ball C.M. (1976) The relation of fluorescence to dissolved organic carbon in surface waters. Water Research, 10, 805-811.

Smetkot-Wensierski W.v., Wozniak B., Graßl H., Doerffer R. (1992) Die Absorptionseigenschaften des marinen Phytoplanktons. GKSS 92/E/105.

Smith R.C., Baker K.S. (1978) The bio-optical state of ocean waters and remote sensing. Limnology and Oceanography, 23, 2, 247-259.

Smith R.C., Baker K.S. (1978) Optical classification of natural waters. Limnology and Oceanography, 23, 2, 260-267.

Smith R.C., Baker K.S. (1981) Optical properties of the clearest natural waters (200-800nm). Applied Optics, 20, 2, 177-184.

Smith R.C., Prézelin B.B., Bidigare R.R., Baker K.S. (1989) Bio-optical modeling of photosynthetic production in coastal waters. Limnology and Oceanography, 34, 8, 1524-1544.

Smith R.C., Prézelin B.B., Baker K.S., Bidigare R.R.,  Boucher N.P., Coley T., Karentz D., MacIntyre S., Matlick H.A.,  Menzies D., Ondrusek M., Wan Z., Waters K.J. (1992) Ozone Depletion: Ultraviolet Radiation and Phytoplankton Biology in Antarctic Waters. Science, 255, 952-959.

Smith D.C., Steward G.F., Long R.A., Azam F. (1995) Bacterial mediation of carbon fluxes during a diatom bloom in a mesocosm. Deep-Sea Research II, 42, 1, 75-97.

Smith R.C., Tyler J.E. (1976) Transmission of Solar Radiation into Natural Waters. Photochemistry and Photobiology, 1, 117-152.

Smith RC & Baker KS (1981) Optical properties of the clearest natural waters (200 - 800 nm). Applied Optics 20: 177

Sogandares F.M., Fry E.S. (1997) Absorption spectrum (340-640) of pure water. I. Photothermal measurements. Appl. Optics,  36, 33,  8699-8709.

Somayajulu B.L.K., Sarin M.M., Ramesh R. (1996) Denitification in the eastern Arabian Sea: Evaluation of the role of continental margins using Ra isotopes. Deep-Sea Research II,  43, 1, 111-117.

Soohoo J., Kiefer D.A. (1982) Vertical distribution of phaepigments - I. A simple grazing and photooxidative scheme for small particles. Deep-Sea Research, 29, 12A, 1539-1551.

Soohoo J., Kiefer D.A. (1982) Vertical distribution of phaepigments - II. Rates of production and kinetics of photooxidation. Deep-Sea Research, 29, 12A, 1553-1563.

Spaargaren D.H., Ceccaldi H.J. (1984) Some relations between the elementary chemical composition of marine organisms and that of sea water. Oceanologica Acta  7, 1, 63-76.

Spinrad R. W., Glover H., Ward B.B., Codispoti L.A., Kullenberg G. (1989) Suspended particle and bacterial maxima in Peruvian coastal waters during a cold water anomaly. Deep-Sea Research, 36, 5, 715-733.

Spitzer D., Dirks R.W.J. (1985) Contamination of the reflectance of natural waters by solar-induced fluorescence of dissolved organic matter. Applied Optics, 24, 4, 444-445.

Stamnes K., et al (1988) Numerically stable algorithm for discrete-ordinate-method radiative transfer in multiple scattering and emitting layered media. Applied Optics 27: 2502-2509

Stavn R., Weidemann A. (1988) Optical modeling of clear ocean light fields: Raman scattering effects. Applied Optics 27: 4002-4011

Stavn R.H., Weidemann A.D. (1989) Shape factors, two-flow models, and the problem of irradiance inversion in estimating optical parameters. Limnology and Oceanography, Vol 34, 8, 1426-1441.

Stavn R. (1990) Raman scattering effects at the shorter visible wavelengths in clear ocean waters. Ocean Optics X 1302: 94-100

Stavn R., Weidemann A. (1992) Raman scattering in ocean optics: quantitative assessment of internal radiant emision. Applied Optics 31: 1294-1303

Stigebrandt A., Aure J., Molvaer J. (1996) Oxygen budget methods to determine the vertical flux of particulate organic matter with application to the coastal waters off western Scandinavia. Deep-Sea Research II, 43, 1, 7-21.

Stewart A.J, Wetzel R.W. (1980) Fluorescence: absorbance ratios - a molecular-weight tracer of dissolved organic matter. Limnol. Oceanogr., 25, 3, 559-564.

Stewart A.J, Wetzel R.W. (1981) Asymmetrical relationship between absorbance, fluorescence, and dissolved organic carbon. Limnol. Oceanogr., 26, 3, 590-597

Stoderegge K., Herndl G.J. (1998) Production and release of bacterial capsular material and its subsequent utilization by marine bacterioplankton. Limnol. Oceanogr., 43, 5, 877-884

Stramski D., Sedlak M. (1994) Application of dynamic light scattering to the study of small marine particles. Applied Optics 33: 4825-4834

Stramski D., Mobley C.M. (1997) Effects of microbial particles on oceanic optics: A database of single-particle optical properties. Limnol. Oceanogr., 42, 3, 538-549

Strass V.(1989) Physikalisch kontrollierte saisonale und horizontale Variabilität von Chlorophyllprofilen. Ergebnisse hydrographisch-optischer Schnitte zwischen den Azoren und Grönland. Berichte a.d. IfM Kiel, Nr.187.

Strass V. (1990) On the calibration of large-scale fluorometric chlorophyll measurements from towed undulating vehicles. Deep-Sea Research, 37, 3, 525-540.

Strom S.L., Benner R., Ziegler S., Dagg M.J. (1997) Planktonic grazers are a potentially important source of marine dissolved organic carbon. Limnology and Oceanography, 45(6), 1364-1374.

Tanaka M., Nakajima T. (1977) Effects of oceanic turbidity and index of refraction of hydrosols on the flux of solar radiation in the atmosphere-ocean system. Journal of Quantum Spectroscopy and Radiative Transfer 18: 93-111

Taylor A.H., Geider R.J., Gilbert F.J.H. (1997) Seasonal and latitudinal dependencies of phytoplankton carbon-to-chlorophyll a ratios: results of a modeling study. Mar. Ecol. Prog. Ser., 152, 51-66.

Thacker W.C., Long R.B. (1988) Fitting dynamics to data. Journal of Geophysical Research, 93, C2, 1227-1240.

Thekaekara M. (1973) Solar energy outside the earth's atmosphere. Solar Energy 14: 109-127

Thingsta T.F., Hagström A., Rassoulzadegard R. (1997) Accumulation of degradable DOC in surface waters: Is it caused by a malfunctioning microbial loop? Limnol. Oceanogr.,  42,  2, 398-404.

Tunzi M.G., Chu M.Y., Bain R.C., Jr. (1974) In vivo fluorescence, extracted fluorescence and chlorophyll concentrations in algal mass measurements. Water research, 8, 623-636.

Traganza E.D. 81969) Fluorescence excitation and emission spectra of dissolved organic matter in sea water. Bulletin of Marine Science, 19, 4, 897.904.

Tranvic L.J. (1993) Microbial transformation of labile dissolved organic matter into humic-like matter in seawater. FEMS Microbiology Ecology 12, 177-183.

Trissl H.-W., Lavergne J. (1994) Fluorescence Induction from Photosystem II: Analytical Equations for the Yields of Photochemistry and Fluorescence Derived from Analysis of a model Including Exciton-Radical Pair Equilibrium And restricted Energy Transfer between Photosynthetic Units. Aust. J. Plant Physiol., 22, 4, 183-193.

Twardowski M.S., Donaghay P.L. (19??) The spectral signature associated with the photobleching of CDOm absorption. SPIE Ocean Optics XIV.

Tyler J.E. (1968) The Secchi disc. Limnol. Oceanogr. 13, 1-6

Tzipermann E., Thacker W.C. (1989) An optimal-control/adjoint-equations approach to studying the oceanic general circulation. Journal of Physical Oceanography, 19, 1471-1483.

Valentine R.L., Zepp R.G. (1993) Formation of carbon monoxide from the photodegradation of terrestrial dissolved organic carbon in natural waters. Environ. Sci. Technol., 27, 2, 409-414.

Valeur Bernard (2002) Molecular Fluorescence: Principles and Applications. Wiley, 402

van Breemen R.B. (1996) Innovations in carotenoid analysis using LC/MS. Analytical Chemistry News and features, May 1, 299A-304A.

Varela R.A., Figueiras F.G., Arbones B., Agusti S. (1998) Determining the contribution of pigments and the nonalgal fractions to total absorption: Toward an improved algorithm. Limnol Oceanogr., Vol43, 3, 449-457.

Veldhuis M.J.W., Kraay G.W., Gieskes W.W.C. (1993) Growth and fluorescence characteristics of ultraplankton on a north-south transect in the eastern North Atlantic. Deep-Sea Research II, 40,  ½, 609-626.

Visser S.A. (1983) Fluorescence phenomena of numic matter of aquatic origin and microbial cultures. In: Christmann R.F., Gjessing E.T. (Ed.) Aquatic and terrestrial humic materials. Aan Arbor Science 1983 Michigan.

Vodacek A., Blough N.V., deGrandpre M.D., Peltzer E.T., Nelson R.K.(1997) Seasonal variation of CDOM and DOC in the Middle Atlantic Bight: Terrestrial inputs and photooxidation. Limnol. Oceanogr.,  42, 4, 674-686.

Vodacek A., Green S.A., Blough N.V. (1994) An experimental model of solar-stimulated fluorescence of chromophoric dissolved organic matter. Limnology and Oceanography, 39, 1, 1-11.

Voss K. J. (1989) Use of the radiance distribution to measure the optical absorption coefficient in the ocean. Limnology and Oceanography 34: 1614-1622

Walrafen G. (1967) Raman spectral studies of the effects of temperature on water structure. Journal of Chemical Physics 47: 114-126

Walrafen G (1967) Raman spectral studies of the effects of tmperature on water structure. J Chem Phys 47: 114

Walrafen G (1969) Continuum model of water- an erroneous interpretation. J Chem Phys 50: 567-569

Webb DJ (1989) Assimilation of data into ocean models. In: Anderson D.L.T., Willebrandt J. (Ed.) Oceanic circulation models: Combining Data and Dynamics, 2333-256. Kluwer Academic Publishers.

Wiltshire KH, Harsdorf S, Smid B, Blöcker G, Reuter R, Schröder F (1998) The determination of algal biomass (as chlorophyll) in suspended matter from the Elbe estuary and the German Bight: a comparison of HPLC, delayed fluorescence and prompt fluorescence methods. Journal of Experimental Marine Biology and Ecology 222, 113-131

Wishner K.F., Ashjian C.J., Gelfman C., Gowing M.M., Kann L., Levin L.A., Mullinfaux L.S., Saltzman J. (1995) Pelagic and benthic ecology of the lower interface of the Eastern Tropical Pacific oxygen minimum zone. Deep-Sea Research I, 42, 1, 93-115.

Wirkowski K., Krol T., Zielinski A., Kuten E.(1998) A light-scattering matrix for unicellar marine phytoplankton. Limnol Oceanogr., 43, 5, 859-869.

Wolfbeis O.S. (1985) Fluorescence of organic natural products. In: Elving P.J., Winefordner J.P.: Chemical Analysis, 77. Schulman S.: Molecular Luminescence Spectroscopy. John Wiley & Sons.

Wozniak B., Dera J., Koblentz-Mishke O.J. (1992) Modeling the relationship between primary production optical properties and nutrients in the sea (as a basis for indirectly estimating primary production. SPIE 1750 Ocean Optics XI,  246-275.

Wroblewski J.S. (1989) A model of the spring bloom in the North Atlantic and ist impact on ocean optics. Limnol.Oceanogr. 34, 8, 1563-1571.

Wunsch C., Minster J.-F. (1982) Methods for box models and ocean circulation tracers: mathematicl programing and nonlinear inverse theory. Journal of Physical Research, 87, C8, 5647-5662.

Yentsch C.S. (1983) Remote sensing of biological substances. In: A.P. Cracknell (editor) Remote Sensing Application in Marine Science and Technology,  263-297. D.Reidel Publishing Company.

Yentsch C.S. (1983a) A note on the fluorescence characteristics of particles that pass through glass-fiber filters. Limnol. Oceanogr., 28, 3, 597-599.

Yentsch C.S., Menzel D.W. (1963) A method for the determination of phytoplankton chlorophyll and phaeophytin by fluorescence. Deep-Sea Research, 10, 221-231.

Yentsch C.S., Phinney D.A. (1985) Spectral fluorescence: an ataxonomic tool for studying the structure of phytoplankton populations. Journal of Plankton Research, 7, 5, 617-632.

Yentsch C.S., Phinney D.A. (1989) A bridge between ocean optics and microbial ecology. Limnol. Oceanogr., 34, 8, 1694-1705.

Yilamz A., Ediger D., Bastürk Ö., Tugrul S. (1994) Phytoplankton fluorescence and deep chlorophyll maxima in the Northeastern Mediteranean. Oceanologica Acta, 17, 1, 69-77.

You Y., Tomzcak M. (1991) Thermocline circulation and ventilation in the Indian Ocean derived from water masss analysis. Deep-Sea Research I, 40, 13-56.

Zafirou O.C., Joussot-Dubien J., Zepp R.G., Zika R.G. (1984) Photochemistry of natural waters. Envion. Sci. Technol., 18, 12, 358A-371A.

Zaneveld J. (1989) An asymptotic closure theory for irradiance in the sea and its inversion to obtain the inherent optical properties. Limnology and Oceanography 34: 1442-1452

Zege E., Kokhanovsky A. (1994) Analytical solution to the optical transfer function of a scattering medium with large particles. Applied Optics 33: 6547-6554

Zepp R.G., Cline D.M. (1977) Rates of direct photolysis in aquatic environment. Environ. Sci. Technol., 11, 4, 359-366.

Zepp R.G. (1978) Quantum Yields of reaction of pollutants in dilute aqueous solution. Environ. Sci, Technol., 12, 3, March 1978, 327-329.

Zepp R.G., Schlotzhauer F. (1981) Comparison of photochemical behaviour of various humic substances in water: III spectroscopic properties of humic substances. Chemosphere, 10,  5, 479-486.

Ziechmann W. (1980) Ein mathematisches Modell zur Beschreibung der Humifizierung. In: Ziechmann W. (1980) Huminstoffe. Verlag Chemie, Weinheim

Zielinski O (1999) Bio-optische Modellierung des pelagischen Ökosystems nördlich der Kanarischen Inseln. Dissertation (PhD Thesis), Institute of Physics, University of Oldenburg, Germany

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